The following programs are offered by Lee University at the ETS campus. These programs were approved by SACSCOC for this site through the substantive change process. Approval and start dates are provided below, along with the current status of each program.
Program | Approval | Start Date | Current Status |
| MA, Pentecostal-Charismatic Theology | The prospectus for Biblical Studies received approval from SACSCOC on June 12, 2007. The name change was accepted in 2021. | The first class for this program was offered in the fall of 2007. | The program is currently active with students enrolled. The program was evaluated in 2014 and 2021. The next evaluation is scheduled for 2026. |
| MA, Marriage and Family Studies | This program reflected the non-licensure version of an already approved program in Marriage and Family Therapy. | The first classes were offered in the fall of 2014. | The program is currently active with students enrolled. The program was evaluated in 2014 and 2021. The next evaluation is scheduled for 2026. |